Gene Ontology¶
- Gene Ontology Data
- How do I find the GO annotations for my set of genes?
- How do I filter my results to show only GO annotations from the ‘biological process’ ontology?
- How do I filter my results to remove those with the IEA (inferred from electronic annotation)
- evidence code?
- How do I analyse my gene list for GO term enrichment?
- Other Gene Ontology searches
- Expression Data
- Pathways
- Where does the pathway data come from?
- How do I find which pathways my gene(s) is/are involved in?
- My gene is in pathway X, how can I find other genes involved in this pathway?
- I am not sure of the exact name of the pathway, how can I find this?
- Can I visualize this pathway data in InterMine?
- How do I find out if my genes or lists of genes have any pathways in common?
- How do I find whether orthologues of my gene(s) share similar pathways or are involved in
- additional pathways?
- Regulatory data
- Orthologues
- Interactions
- Do you load genetic and physical interaction data?
- I am only interested in physical interactions, how do I filter out the genetic interactions?
- How do I find the experimental procedure that was used to predict the interactions?
- I am only interested in high-confidence interactions, how do I find these?
- How do I view the interactions for my gene/protein?
- How do I find orthologues for my interacting genes/proteins?
- Do the orthologues for my interacting genes also interact? (interologues).